mw. dr. J.Z. (Judy) Shamoun-Baranes
-
Faculteit der Natuurwetenschappen, Wiskunde en Informatica
IBED
-
POSTBUS
94248
1090 GE Amsterdam
Kamernummer: C4.168
-
J.Z.Shamoun-Baranes@uva.nl
T: 0205257436
I am an Assistant Professor in the interdisciplinary research group Computational Geo-Ecology, in the Institute for Biodiversity and Ecosystem Dynamics.
Research interests
I am fascinated with avian flight behaviour, whether during
migration, foraging movements or when fleeing from potential
danger. Birds fly through a challenging environment whose
characteristics vary within and between days, seasons, years,
altitudes and landscapes and they have evolved diverse
strategies to contend with this variability. Atmospheric
dynamics may be an energetic source or sink during flight. By
integrating models, diverse measurements of bird movement (GPS
tracking,radar, field observations) and meteorology, I am
trying to understand the short and long term consequences of
behavioural responses to dynamic atmospheric conditions at
different scales in space and time.
The development of a new GPS tracking system at UvA
(www.uva-bits.nl) has recently enabled me to study the detailed
movements of individual birds throughout their annual routine.
This provides great opportunities to study the diversity and
variation of foraging and migratory behaviour at the individual
and species level and its potential importance in an ever
changing world.
Due to the multi-disciplinary nature of my research, I am
privileged to collaborate with diverse researchers with
expertise in specific species, technological developments,
meteorology, modelling, data management and visualization.
While developing tools for data analysis and visualization is
not the main aim of my research, it is often a fruitful
investment which I enjoy being involved in.
Education
I am involved in the BSc programs of Biology and Future Planet Studies as
well as the MSc programs Ecology and Evolution, and Earth Sciences. I
coordinate and develop course material for "Toekomstperspectief voor de aarde",
provide guest lectures, computer exercises (GIS and working with databases), and
am involved in excursions in several courses. My contributions are usually
related to biodiversity or working with biological data. Furthermore I supervise
students working on their BSc and MSc thesis projects.
Every two years, I coordinate an international summer school on Animal Movement
Analysis for graduate students, together with my colleagues from CGE. Our most
recent course was held in the summer of 2012 (see photo below).
Links
Public lectures & more
In addition to speaking at scientific conferences and workshops, on occasion
I have been invited to give lectures or interviews for a more general public.
These events have been, without exception, stimulating and great fun. I'd like
to thank all those that have invited me, come to listen and ask great questions.
Below are links to a few of these events:
People
I find that one of the great benefits of research is working with different people, and when doing interdisciplinary research, this often means people with diverse backgrounds, expertise and even research cultures. While this can be challenging at times it is also an enriching experience.
Collaboration
I collaborate with several people on a regular basis; those I work most closely with are Willem Bouten and Emiel van Loon from CGE on migration, foraging ecology and methodology, as well as with the PhD candidates I am supervising. On radar ornithology related issues I work with Adriaan Dokter from CGE, Hidde Leijnse from KNMI and Hans van Gasteren from the Royal Netherlands Air Force. I work closely with Kees Camphuysen from the NIOZ on the foraging ecology of lesserblack backed gulls ( Larus fuscus ).
European Network for the Radar surveillance of Animal Movement (ENRAM)
Recently a mutli-disciplinary group of researchers that are using or
developing ground based radar to monitor weather or animal movements in Europe
have come together to create a currently informal research network. One of the
aims of our network are to bring our expertise together to monitor and predict
animal movement patterns on a continental scale, while improving meteorological
products from weather radar.
Hopefully in the not to distant future we will have a website where you can
learn more about this initiative. We are also proud to announce that the ENRAM
COST Action (ES-1305) was approved by the COST Committee of Senior Officials at
its 187th meeting in May 2013.
PhD Supervision
I am currently supervising the PhD research of Jamie McLaren and Wouter Vansteelant. On 18 October 2012 Michael Kemp received his PhD. They are all working on diverse aspects of avian migration, see their websites for more details:
MSc students
I am always on the lookout for enthusiastic MSc students, interested in doing research on bird migration, foraging ecology or flight strategies and not afraid of working with real data or simulation models. If you are interested, contact me for an appointment.
2015
- W.M.G. Vansteelant, W. Bouten, R.H.G. Klaassen, B.J. Koks, A.E. Schlaich, J. van Diermen, E.E. van Loon & J. Shamoun-Baranes (2015). Regional and seasonal flight speeds of soaring migrants and the role of weather at hourly and daily scales. Journal of Avian Biology, 46 (1), 25-39. doi: 10.1111/jav.00457[go to publisher's site]
2014
- J. Shamoun-Baranes, J.A. Alves, S. Bauer, A.M. Dokter, O. Hüppop, J. Koistinen, H. Leijnse, F. Liechti, H. van Gasteren & J.W. Chapman (2014). Continental-scale radar monitoring of the aerial movements of animals. Movement Ecology, 2, 9. doi: 10.1186/2051-3933-2-9[go to publisher's site]
- J.D. McLaren, J. Shamoun-Baranes, A.M. Dokter, R.H.G. Klaassen & W. Bouten (2014). Optimal orientation in flows: providing a benchmark for animal movement strategies. Journal of the Royal Society Interface, 11 (99), 20140588. doi: 10.1098/rsif.2014.0588[go to publisher's site]
- M Bulte, J.D. McLaren, F. Bairlein, W. Bouten, H. Schmaljohann & J. Shamoun-Baranes (2014). Can wheatears weather the Atlantic? Modeling non-stop trans-Atlantic flights of a small migratory songbird. Auk, 131 (3), 363-370. doi: 10.1642/AUK-13-233.1
- H. van Gasteren, I Both, J.Z. Shamoun-Baranes, J.O. Laloë & W. Bouten (2014). A pilot study on GPS tracking of Common Buzzards Buteo buteo at military airfields to advance bird strike prevention. Limosa, 87 (2), 107-116.
- U Demšar, K. Buchin, E.E. van Loon & J. Shamoun-Baranes (2014). Stacked space-time densities: a geovisualisation approach to explore dynamics of space use over time. GeoInformatica, 19 (1), 85-115. doi: 10.1007/s10707-014-0207-5
- W.M.G. Vansteelant, B. Verhelst, J. Shamoun-Baranes, W. Bouten, E.E. van Loon & K.L. Bildstein (2014). Effect of wind, thermal convection, and variation in flight strategies on the daily rhythm and flight paths of migrating raptors at Georgia's Black Sea coast. Journal of Field Ornithology, 85 (1), 40-55. doi: 10.1111/jofo.12048[go to publisher's site]
2013
- M.U. Kemp, J. Shamoun-Baranes, A.M. Dokter, E. van Loon & W. Bouten (2013). The influence of weather on the flight altitude of nocturnal migrants in mid-latitudes. Ibis, 155 (4), 734-749. doi: 10.1111/ibi.12064
- J. Shamoun-Baranes & C.J. Camphuysen (2013). Population dynamics in lesser black-backed gulls in the Netherlands reveal no response to North Sea regime shift: comment on Luczak et al. 2012. Biology Letters, 9 (3), 20121085. doi: 10.1098/rsbl.2012.1085
- J.D. McLaren, J. Shamoun-Baranes & W. Bouten (2013). Stop early to travel fast: modelling risk-averse scheduling among nocturnally migrating birds. Journal of Theoretical Biology, 316, 90-98. doi: 10.1016/j.jtbi.2012.09.021
- A.M. Dokter, J. Shamoun-Baranes, M.U. Kemp, S. Tijm & I. Holleman (2013). High Altitude Bird Migration at Temperate Latitudes: A Synoptic Perspective on Wind Assistance. PLoS One, 8 (1), e523. doi: 10.1371/journal.pone.0052300[go to publisher's site]
- W. Bouten, E.W. Baaij, J. Shamoun-Baranes & K.C.J. Camphuysen (2013). A flexible GPS tracking system for studying bird behaviour at multiple scales. Journal of Ornithology, 154 (2), 571-580. doi: 10.1007/s10336-012-0908-1[go to publisher's site]
2012
- J. Tanha, M. van Someren, M. de Bakker, W. Bouten, J. Shamoun-Baranes & H. Afsarmanesh (2012). Multiclass semi-supervised learning for animal behavior recognition from accelerometer data. In 24th IEEE International Conference on Tools with Artificial Intelligence (pp. 690-697). Athens: IEEE.
- M.U. Kemp, J. Shamoun-Baranes, E.E. van Loon, J.D. McLaren, A.M. Dokter & W. Bouten (2012). Quantifying flow-assistance and implications for movement research. Journal of Theoretical Biology, 308, 56-67. doi: 10.1016/j.jtbi.2012.05.026
- J. Shamoun-Baranes, E.E. van Loon, R.S. Purves, B. Speckmann, D. Weiskopf & C.J. Camphuysen (2012). Analysis and visualization of animal movement. Biology Letters, 8, 6-9. doi: 10.1098/rsbl.2011.0764
- M.U. Kemp, E.E. van Loon, J. Shamoun-Baranes & W. Bouten (2012). RNCEP: global weather and climate data at your fingertips. Methods in Ecology and Evolution, 3, 65-70. doi: 10.1111/j.2041-210X.2011.00138.x
- R.H.G. Klassen, B.J. Ens, J. Shamoun-Baranes, K.M. Exo & F. Bairlein (2012). Migration strategy of a flight generalist, the Lesser Black-backed Gull Larus fuscus. Behavioral Ecology, 23 (1), 58-68. doi: 10.1093/beheco/arr150[go to publisher's site]
- C.J. Camphuysen, J. Shamoun-Baranes, W. Bouten & S. Garthe (2012). Identifying ecologically important marine areas for seabirds using behavioural information in combination with distribution patterns. Biological Conservation, 156 (Nov-Dec), 22-29. doi: 10.1016/j.biocon.2011.12.024
- J. Shamoun-Baranes, R. Bom, E.E. van Loon, B.J. Ens, K. Oosterbeek & W. Bouten (2012). From sensor data to animal behaviour: an oystercatcher example. PLoS One, 7 (5), e37997. doi: 10.1371/journal.pone.0037997[go to publisher's site]
- J.D. McLaren, J. Shamoun-Baranes & W. Bouten (2012). Wind selectivity and partial compensation for wind drift among nocturnally migrating passerines. Behavioral Ecology, 23 (5), 1089-1101. doi: 10.1093/beheco/ars078
2011
- J. Shamoun-Baranes, A.M. Dokter, H. van Gasteren, E.E. van Loon, H. van Leijnse & W. Bouten (2011). Birds flee en mass from New Year's Eve fireworks. Behavioral Ecology, 22 (6), 1173-1177. doi: 10.1093/beheco/arr102[go to publisher's site]
- E.E. van Loon, J. Shamoun-Baranes, W. Bouten & S.L. Davis (2011). Understanding soaring bird migration through interactions and decisions at the individual level. Journal of Theoretical Biology, 270 (1), 112-126. doi: 10.1016/j.jtbi.2010.10.038
- J. Shamoun-Baranes, W. Bouten, C.J. Camphuysen & E. Baaij (2011). Riding the tide: intriguing observations of gulls resting at sea during breeding. Ibis, 153 (2), 411-415. doi: 10.1111/j.1474-919X.2010.01096.x
- J. Shamoun-Baranes & H. van Gasteren (2011). Atmospheric conditions facilitate mass migration events across the North Sea. Animal Behaviour, 81 (4), 691-704. doi: 10.1016/j.anbehav.2011.01.003
2010
- W.D. Robinson, M.S. Bowlin, I. Bisson, J. Shamoun-Baranes, K. Thorup, R.H. Diehl, T.H. Kunz, S. Mabey & D.W. Winkler (2010). Integrating concepts and technologies to advance the study of bird migration. Frontiers in Ecology and the Environment, 8 (7), 354-361.
- C.J. Camphuysen, P. de Boer, W. Bouten, A. Gronert & J. Shamoun-Baranes (2010). Mammalian prey in Laridae: increased predation pressure on mammal populations expected. Lutra, 53 (1), 5-20.
- J. Shamoun-Baranes, J. Leyrer, E. van Loon, P. Bocher, F. Robin, F. Meunier & T. Piersma (2010). Stochastic atmospheric assistance and the use of emergency staging sites by migrants. Proceedings of the Royal Society B-Biological Sciences, 277, 1505-1511.[go to publisher's site]
- M.S. Bowlin, I. Bisson, J. Shamoun-Baranes, J.D. Reichard, N. Sapir, P. Marra, T.H. Kunz, D.S. Wilcove, A. Hedenstrom, C.G. Guglielmo, S. Akesson, M. Ramenofsky & M. Wikelski (2010). Grand challenges in migration biology. Integrative and Comparative Biology, 50 (3), 261-279.
- M.U. Kemp, J. Shamoun-Baranes, H. van Gasteren, W. Bouten & E.E. van Loon (2010). Can wind help explain seasonal differences in avian migration speed? Journal of Avian Biology, 41 (6), 672-677.
- J. Shamoun-Baranes, W. Bouten & E.E. van Loon (2010). Integrating meteorology into research on migration. Integrative and Comparative Biology, 50 (3), 280-292. doi: 10.1093/icb/icq011[go to publisher's site]
2009
- B.J. Ens, F. Bairlein, K. Camphuysen, P. de Boer, K.M. Exo, N. Gallego, R.H.G. Klaassen, K. Oosterbeek & J. Shamoun-Baranes (2009). Onderzoek aan meeuwen met satellietzenders. Limosa, 82 (1), 33-42.
2008
- H. van Gasteren, I. Holleman, W. Bouten, E. van Loon & J. Shamoun-Baranes (2008). Extracting bird migration information from C-band Doppler weather radars. Ibis, 150 (4), 674-686.
- J. Shamoun-Baranes, W. Bouten, L. Buurma, R. DeFusco, A. Dekker, H. Sierdsema, F. Sluiter, J. van Belle, H. van Gasteren & E. van Loon (2008). Avian information systems: Developing web-based bird avoidance models. Ecology and Society, 13 (2), 38.[go to publisher's site]
2010
- A. Ginati, A.D. Coppola, G. Garofalo, J. Shamoun-Baranes, W. Bouten, H. van Gasteren, A. Dekker & S. Sorbi (2010). FlySafe: an early warning system to reduce risk of bird strikes. European Space Agency bulletin, 46-55.[go to publisher's site]
2008
- H. van Gasteren, J. Shamoun-Baranes, A. Ginati & G. Garofalo (2008). Avian Alert - a bird migration early warning system. In Proceedings of the 59th International Astronautical Congress (IAC 2008) (pp. 1-9).[go to publisher's site]
- Geen nevenwerkzaamheden
