Dr P.L.E.A. (Pilou) Bazin
Faculty of Social and Behavioural Sciences
Programme group Brain and Cognition
Visiting address
- Nieuwe Achtergracht 129
Postal address
- Postbus 15915
1001 NK Amsterdam
Contact details
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Publications
2020
- Alkemade, A., Mulder, M. J., Groot, J. M., Isaacs, B. R., van Berendonk, N., Lute, N., Isherwood, S. J., Bazin, P-L., & Forstmann, B. U. (2020). The Amsterdam Ultra-high field adult lifespan database (AHEAD): A freely available multimodal 7 Tesla submillimeter magnetic resonance imaging database. NeuroImage, 221, 117200. https://doi.org/10.1016/j.neuroimage.2020.117200
- Alkemade, A., Pine, K., Kirilina, E., Keuken, M. C., Mulder, M. J., Balesar, R., Groot, J. M., Bleys, R. L. A. W., Trampel, R., Weiskopf, N., Herrler, A., Möller, H. E., Bazin, P-L., & Forstmann, B. U. (2020). 7 Tesla MRI Followed by Histological 3D Reconstructions in Whole-Brain Specimens. Frontiers in Neuroanatomy, 14, [536838]. https://doi.org/10.3389/fnana.2020.536838
Bazin, P-L., Alkemade, A., Mulder, M. J., Henry, A. G., & Forstmann, B. U. (2020). Multi-contrast anatomical subcortical structures parcellation. eLife, 9, [e59430]. https://doi.org/10.7554/eLife.59430 [details]- Bazin, P-L., Nijsse, H. E., van der Zwaag, W., Gallichan, D., Alkemade, A., Vos, F. M., Forstmann, B. U., & Caan, M. W. A. (2020). Sharpness in motion corrected quantitative imaging at 7T. NeuroImage, 222, [117227]. https://doi.org/10.1016/j.neuroimage.2020.117227 [details]
- Boillat, Y., Bazin, P-L., & van der Zwaag, W. (2020). Whole-body somatotopic maps in the cerebellum revealed with 7T fMRI. NeuroImage, 211, [116624]. https://doi.org/10.1016/j.neuroimage.2020.116624 [details]
- Gau, R., Bazin, P-L., Trampel, R., Turner, R., & Noppeney, U. (2020). Resolving multisensory and attentional influences across cortical depth in sensory cortices. eLife, 9, [e46856]. https://doi.org/10.7554/eLife.46856 [details]
- Isaacs, B. R., Keuken, M. C., Alkemade, A., Temel, Y., Bazin, P-L., & Forstmann, B. U. (2020). Methodological Considerations for Neuroimaging in Deep Brain Stimulation of the Subthalamic Nucleus in Parkinson's Disease Patients. Journal of Clinical Medicine, 9(10). https://doi.org/10.3390/jcm9103124
- Isaacs, B. R., Mulder, M. J., Groot, J. M., van Berendonk, N., Lute, N., Bazin, P-L., Forstmann, B. U., & Alkemade, A. (2020). 3 versus 7 Tesla magnetic resonance imaging for parcellations of subcortical brain structures in clinical settings. PLoS ONE, 15(11), e0236208. https://doi.org/10.1371/journal.pone.0236208
- Kalloch, B., Bazin, P-L., Villringer, A., Sehm, B., & Hlawitschka, M. (2020). A flexible workflow for simulating transcranial electric stimulation in healthy and lesioned brains. PLoS ONE, 15(5), [e0228119]. https://doi.org/10.1371/journal.pone.0228119 [details]
- Kirilina, E., Helbling, S., Morawski, M., Pine, K., Reimann, K., Jankuhn, S., Dinse, J., Deistung, A., Reichenbach, J. R., Trampel, R., Geyer, S., Müller, L., Jakubowski, N., Arendt, T., Bazin, P-L., & Weiskopf, N. (2020). Superficial white matter imaging: Contrast mechanisms and whole-brain in vivo mapping. Science Advances, 6(41), [eaaz9281]. https://doi.org/10.1126/sciadv.aaz9281
- Miletić, S., Bazin, P-L., Weiskopf, N., van der Zwaag, W., Forstmann, B. U., & Trampel, R. (2020). fMRI protocol optimization for simultaneously studying small subcortical and cortical areas at 7 T. NeuroImage, 219, [116992]. https://doi.org/10.1016/j.neuroimage.2020.116992 [details]
2019
- Babayan, A., Erbey, M., Kumral, D., Reinelt, J. D., Reiter, A. M. F., Röbbig, J., ... Villringer, A. (2019). A mind-brain-body dataset of MRI, EEG, cognition, emotion, and peripheral physiology in young and old adults. Scientific Data, 6, [180308]. https://doi.org/10.1038/sdata.2018.308 [details]
- Bazin, P-L., Alkemade, A., van der Zwaag, W., Caan, M., Mulder, M., & Forstmann, B. U. (2019). Denoising High-Field Multi-Dimensional MRI With Local Complex PCA. Frontiers in Neuroscience, 13, [1066]. https://doi.org/10.3389/fnins.2019.01066 [details]
- Caan, M. W. A., Bazin, P-L., Marques, J. P., de Hollander, G., Dumoulin, S. O., & van der Zwaag, W. (2019). MP2RAGEME: T1 , T2* , and QSM mapping in one sequence at 7 tesla. Human Brain Mapping, 40(6), 1786-1798. https://doi.org/10.1002/hbm.24490 [details]
- Heuer, K., Gulban, O. F., Bazin, P-L., Osoianu, A., Valabregue, R., Santin, M., Herbin, M., & Toro, R. (2019). Evolution of neocortical folding: A phylogenetic comparative analysis of MRI from 34 primate species. Cortex, 118, 275-291. https://doi.org/10.1016/j.cortex.2019.04.011 [details]
- Huck, J., Wanner, Y., Fan, A. P., Jäger, A-T., Grahl, S., Schneider, U., Villringer, A., Steele, C. J., Tardif, C. L., Bazin, P-L., & Gauthier, C. J. (2019). High resolution atlas of the venous brain vasculature from 7 T quantitative susceptibility maps. Brain Structure and Function, 224(7), 2467-2485. https://doi.org/10.1007/s00429-019-01919-4 [details]
- Kalloch, B., Bode, J., Kozlov, M., Pampel, A., Hlawitschka, M., Sehm, B., Villringer, A., Möller, H. E., & Bazin, P-L. (2019). Semi-automated generation of individual computational models of the human head and torso from MR images. Magnetic Resonance in Medicine, 81(3), 2090-2105. https://doi.org/10.1002/mrm.27508 [details]
- Lampe, L., Kharabian-Masouleh, S., Kynast, J., Arelin, K., Steele, C. J., Löffler, M., Witte, A. V., Schroeter, M. L., Villringer, A., & Bazin, P-L. (2019). Lesion location matters: The relationships between white matter hyperintensities on cognition in the healthy elderly. Journal of cerebral blood flow and metabolism, 39(1), 36-43. https://doi.org/10.1177/0271678X17740501 [details]
- Lampe, L., Zhang, R., Beyer, F., Huhn, S., Kharabian Masouleh, S., Preusser, S., ... Witte, A. V. (2019). Visceral obesity relates to deep white matter hyperintensities via inflammation. Annals of Neurology, 85(2), 194-203. https://doi.org/10.1002/ana.25396 [details]
- Mulder, M. J., Keuken, M. C., Bazin, P. L., Alkemade, A., & Forstmann, B. U. (2019). Size and shape matter: the impact of voxel geometry on the identification of small nuclei. PLoS ONE, 14(4), [e0215382]. https://doi.org/10.1371/journal.pone.0215382
- Trampel, R., Bazin, P-L., Pine, K., & Weiskopf, N. (2019). In-vivo magnetic resonance imaging (MRI) of laminae in the human cortex. NeuroImage, 197, 707-715. https://doi.org/10.1016/j.neuroimage.2017.09.037 [details]
- van Mourik, T., van der Eerden, J. P. J. M., Bazin, P-L., & Norris, D. G. (2019). Laminar signal extraction over extended cortical areas by means of a spatial GLM. PLoS ONE, 14(3), [e0212493]. https://doi.org/10.1371/journal.pone.0212493 [details]
2018
- Henry, A. G., Büdel, T., & Bazin, P-L. (2018). Towards an understanding of the costs of fire. Quaternary International, 493, 96-105. https://doi.org/10.1016/j.quaint.2018.06.037 [details]
- Huhn, S., Beyer, F., Zhang, R., Lampe, L., Grothe, J., Kratzsch, J., Willenberg, A., Breitfeld, J., Kovacs, P., Stumvoll, M., Trampel, R., Bazin, P-L., Villringer, A., & Witte, A. V. (2018). Effects of resveratrol on memory performance, hippocampus connectivity and microstructure in older adults - A randomized controlled trial. NeuroImage, 174, 177-190. https://doi.org/10.1016/j.neuroimage.2018.03.023
- Huntenburg, J. M., Steele, C. J., & Bazin, P-L. (2018). Nighres: processing tools for high-resolution neuroimaging. GigaScience, 7(7), [giy082]. https://doi.org/10.1093/gigascience/giy082 [details]
2017
- Keuken, M. C., Bazin, P-L., Backhouse, K., Beekhuizen, S., Himmer, L., Kandola, A., Lafeber, J. J., Prochazkova, L., Trutti, A., Schäfer, A., Turner, R., & Forstmann, B. U. (2017). Effects of aging on T1, T∗2, and QSM MRI values in the subcortex. Brain Structure and Function, 222(6), 2487-2505. https://doi.org/10.1007/s00429-016-1352-4 [details]
2014
- Forstmann, B. U., Keuken, M. C., Schafer, A., Bazin, P-L., Alkemade, A., & Turner, R. (2014). Multi-modal ultra-high resolution structural 7-Tesla MRI data repository. Scientific Data, 1, [140050]. https://doi.org/10.1038/sdata.2014.50 [details]
- Keuken, M. C., Bazin, P-L., Crown, L., Hootsmans, J., Laufer, A., Müller-Axt, C., ... Forstmann, B. U. (2014). Quantifying inter-individual anatomical variability in the subcortex using 7 T structural MRI. NeuroImage, 94(1), 40-46. https://doi.org/10.1016/j.neuroimage.2014.03.032 [details]
- de Hollander, G., Keuken, M. C., Bazin, P-L., Weiss, M., Neumann, J., Reimann, K., ... Schäfer, A. (2014). A gradual increase of iron toward the medial‐inferior tip of the subthalamic nucleus. Human Brain Mapping, 35(9), 4440-4449. https://doi.org/10.1002/hbm.22485 [details]
2013
- Keuken, M. C., Bazin, P-L., Schäfer, A., Neumann, J., Turner, R., & Forstmann, B. U. (2013). Ultra-high 7T MRI of structural age-related changes of the subthalamic nucleus. The Journal of Neuroscience, 33(11), 4896-4900. https://doi.org/10.1523/JNEUROSCI.3241-12.2013 [details]
2012
- Forstmann, B. U., Keuken, M. C., Jahfari, S., Bazin, P-L., Neumann, J., Schäfer, A., ... Turner, R. (2012). Cortico-subthalamic white matter tract strength predicts interindividual efficacy in stopping a motor response. NeuroImage, 60(1), 370-375. https://doi.org/10.1016/j.neuroimage.2011.12.044 [details]
Others
- Forstmann, B. (organiser), Matzke, D. (organiser), Heathcote, A. (organiser), Miletić, S. (organiser) & Bazin, P.-L. (organiser) (5-8-2019 - 14-8-2019). Model-based Neuroscience Summer School and Brainhack (organising a conference, workshop, ...).
2020
- Bazin, P. L. E. A. (26-10-2020). Statistics files. Universiteit van Amsterdam. https://doi.org/10.21942/uva.12452444.v2.
- Alkemade, J. M., Pine, K., Kirilina, E., Keuken, M., Mulder, M., Balesar, R., Groot, J. M., L. A. W. Bleys, R., Trampel, R., Weiskopf, N., Herrler, A., Möller, H., Bazin, P. & Forstmann, B. (14-9-2020). 7 Tesla MRI followed by histological 3D reconstructions in whole-brain specimens. Universiteit van Amsterdam. https://doi.org/10.21942/uva.12496853.v1.
- Alkemade, J. M., Mulder, M., Groot, J. M., Isaacs, B., Berendonk, N. v., Lute, N., Isherwood, S. J. S., Bazin, P. L. E. A. & Forstmann, B. U. (27-7-2020). The Amsterdam Ultra-high field adult lifespan database (AHEAD): A freely available multimodal 7 Tesla submillimeter magnetic resonance imaging database. Universiteit van Amsterdam. https://doi.org/10.21942/uva.10007840.v1.
- Bazin, P. L. E. A. (14-5-2020). MASSP structures prior. Universiteit van Amsterdam. https://doi.org/10.21942/uva.12074175.v1.
- Bazin, P. L. E. A. (14-5-2020). Sample Whole-Brain MP2RAGEME. Universiteit van Amsterdam. https://doi.org/10.21942/uva.12280316.v2.
- Bazin, P. L. E. A., Forstmann, B. & Alkemade, A. (14-5-2020). AHEAD template. Universiteit van Amsterdam. https://doi.org/10.21942/uva.12301106.v2.
- Bazin, P. L. E. A., Caan, M. W. A., Forstmann, B. U., Alkemade, A., van der Zwaag, W., Vos, F. M., Gallichan, D. & Nijsse, H. E. (6-5-2020). Sharpness in Motion Corrected Quantitative Imaging at 7T. Universiteit van Amsterdam. https://doi.org/10.21942/uva.12220658.v1.
2019
- Bazin, P. L. E. A. (5-4-2019). Processed example. Universiteit van Amsterdam. https://doi.org/10.21942/uva.7952255.v1.
- Bazin, P. L. E. A. (5-4-2019). Raw measurements for the statistics. Universiteit van Amsterdam. https://doi.org/10.21942/uva.7952270.v1.
- Bazin, P. L. E. A. (5-4-2019). Example MP2RAGEME data set. Universiteit van Amsterdam. https://doi.org/10.21942/uva.7938326.v1.
- Bazin, P. L. E. A. (5-4-2019). Data processing script. Universiteit van Amsterdam. https://doi.org/10.21942/uva.7952297.v1.
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Ancillary activities
No known ancillary activities
Bazin, P-L., Alkemade, A., Mulder, M. J., Henry, A. G., & Forstmann, B. U. (2020). Multi-contrast anatomical subcortical structures parcellation. eLife, 9, [e59430].