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dhr. prof. dr. M.T. (Marian) Bubak

Faculteit der Natuurwetenschappen, Wiskunde en Informatica
Informatics Institute

Bezoekadres
  • Science Park 904
Postadres
  • Postbus 94323
    1090 GH Amsterdam
Contactgegevens
  • Publicaties

    2020

    • Gerhards, M., Sander, V., Živković, M., Belloum, A., & Bubak, M. (2020). New Approach to Allocation Planning of Many-task Workflows on Clouds. Concurrency and Computation: Practice and Experience, 32(2), [e5404]. https://doi.org/10.1002/cpe.5404 [details]

    2018

    • Bobák, M., Belloum, A. S. Z., Nowakowski, P., Meizner, J., Bubak, M., Heikkurinen, M., ... Hluchý, L. (2018). Exascale computing and data architectures for brownfield applications. In M. Li, X. Ning, Z. Xiao, G. Xiao, K. Li, & L. Wang (Eds.), ICNC-FSKD 2018: 14th International Conference on Natural Computation, Fuzzy Systems and Knowledge Discovery : Huangshan, Anhui, China, 28-30 July, 2018 (pp. 450-457). Piscataway, NJ: IEEE. https://doi.org/10.1109/FSKD.2018.8686900 [details]
    • Boukhanovsky, A. V., Krzhizhanovskaya, V. V., & Bubak, M. (2018). Urgent computing for decision support in critical situations. Future Generation Computer Systems, 79(1), 111-113. https://doi.org/10.1016/j.future.2017.11.003 [details]

    2016

    2015

    • Wibisono, A., Bloem, P., de Vries, G. K. D., Groth, P., Belloum, A., & Bubak, M. (2015). Generating scientific documentation for computational experiments using provenance. In B. Ludäscher, & B. Plale (Eds.), Provenance and Annotation of Data and Processes: 5th International Provenance and Annotation Workshop, IPAW 2014, Cologne, Germany, June 9-13, 2014 : revised selected papers (pp. 168-179). (Lecture Notes in Computer Science; Vol. 8628). Cham: Springer. https://doi.org/10.1007/978-3-319-16462-5_13 [details]

    2014

    • Cushing, R., Belloum, A., Bubak, M., & de Laat, C. (2014). Automata-Based Dynamic Data Processing for Clouds. In L. Lopes (Ed.), Euro-Par 2014: Parallel Processing Workshops: Euro-Par 2014 International Workshops, Porto, Portugal, August 25-26, 2014 : revised selected papers (Vol. 1, pp. 93-104). (Lecture Notes in Computer Science; Vol. 8805). Cham: Springer. https://doi.org/10.1007/978-3-319-14325-5_9 [details]
    • Cushing, R., Koulouzis, S., Belloum, A., & Bubak, M. (2014). Applying workflow as a service paradigm to application farming. Concurrency and Computation: Practice and Experience, 26(6), 1297-1312. https://doi.org/10.1002/cpe.3073 [details]
    • Koulouzis, S., Vasunin, D., Belloum, A. S. Z., & Bubak, M. T. (2014). Data Storage Federation for VPH Applications. In Virtual Physiological Human Conference 2014 Trondheim September.
    • Koulouzis, S., Vasyunin, D., Cushing, R., Belloum, A., & Bubak, M. (2014). Cloud Data Storage Federation for Scientific Applications. In D. an Mey, M. Alexander, P. Bientinesi, M. Cannataro, C. Clauss, A. Costan, G. Kecskemeti, C. Morin, L. Ricci, J. Sahuquillo, M. Schulz, V. Scarano, S. L. Scott, ... J. Weidendorfer (Eds.), Euro-Par 2013: Parallel Processing Workshops: BigDataCloud, DIHC, FedICI, HeteroPar, HiBB, LSDVE, MHPC, OMHI, PADABS, PROPER, Resilience, ROME, and UCHPC 2013, Aachen, Germany, August 26-27, 2013 : revised selected papers (pp. 13-22). (Lecture Notes in Computer Science; Vol. 8374). Heidelberg: Springer. https://doi.org/10.1007/978-3-642-54420-0_2 [details]

    2013

    • Baranowski, M., Belloum, A., & Bubak, M. (2013). MapReduce Operations with WS-VLAM Workflow Management System. Procedia Computer Science, 18, 2599-2602. https://doi.org/10.1016/j.procs.2013.05.449 [details]
    • Cushing, R., Bubak, M., Belloum, A., & de Laat, C. (2013). Beyond Scientific Workflows: Networked Open Processes. In Proceedings: IEEE Ninth International Conference on e-Science: 22-25 October 2013, Beijing, China (pp. 357-364). Los Alamitos, CA: IEEE Computer Society. https://doi.org/10.1109/eScience.2013.51 [details]
    • Cushing, R., Herawan, G., Putra, H., Belloum, A., Bubak, M., & de Laat, C. (2013). Distributed Computing on an Ensemble of Browsers. IEEE Internet Computing, 17(5), 42-61. https://doi.org/10.1109/MIC.2013.28 [details]
    • Wibisono, A., Koning, R., Grosso, P., Belloum, A., Bubak, M., & de Laat, C. (2013). OIntEd: online ontology instance editor enabling a new approach to ontology development. Software, practice & experience, 43(11), 1319-1335. https://doi.org/10.1002/spe.2141 [details]

    2012

    • Baranowski, M., Belloum, A., Bubak, M., & Malawski, M. (2012). Constructing workflows from script applications. Scientific Programming, 20(4), 359-377. https://doi.org/10.3233/SPR-120358 [details]
    • Borgdorff, J., Bona-Casas, C., Mamonski, M., Kurowski, K., Piontek, T., Bosak, B., ... Hoekstra, A. G. (2012). A distributed multiscale computation of a tightly coupled model using the Multiscale Modeling Language. Procedia Computer Science, 9, 596-605. https://doi.org/10.1016/j.procs.2012.04.064 [details]
    • Cushing, R., Belloum, A. S. Z., Korkhov, V., Vasyunin, D., Bubak, M., & Leguy, C. (2012). Workflow as a service: an approach to workflow farming. In Proceedings of the 21st international symposium on high-performance parallel and distributed computing & co-located workshops: ECMLS'12: June 18-22, 2012, Delft, the Netherlands (pp. 23-31). New York: ACM. https://doi.org/10.1145/2483954.2483960 [details]
    • Cushing, R., Koulouzis, S., Strijkers, R., Belloum, A. S. Z., & Bubak, M. (2012). Service Level Management for executable papers. In M. Alexander, P. D' Ambra, A. Belloum, G. Bosilca, M. Cannataro, M. Danelutto, B. Di Martino, M. Gerndt, E. Jeannot, R. Namyst, J. Roman, S. L. Scott, J. Larsson Traff, G. Vallée, ... J. Weidendorfer (Eds.), Euro-Par 2011: Parallel Processing Workshops: CCPI, CGWS, HeteroPar, HiBB, HPCVirt, HPPC, HPSS, MDGS, ProPer, Resilience, UCHPC, VHPC: Bordeaux, France, August 29-September 2, 2011: revised selected papers (Vol. 2, pp. 116-123). (Lecture Notes in Computer Science; Vol. 7156). Heidelberg: Springer. https://doi.org/10.1007/978-3-642-29740-3_14 [details]

    2011

    • Belloum, A., Inda, M. A., Vasunin, D., Korkhov, V., Zhao, Z., Rauwerda, H., ... Hertzberger, L. O. (2011). Collaborative e-Science Experiments and Scientific Workflows. IEEE Internet Computing, 15(4), 39-47. https://doi.org/10.1109/MIC.2011.87 [details]
    • Berretz, F., Skorupa, S., Sander, V., Belloum, A., & Bubak, M. (2011). Actor-driven workflow execution in distributed environments. In M. R. Guarracino, F. Vivien, J. Larsson Träff, M. Cannataro, M. Danelutto, A. Hast, F. Perla, A. Knüpfer, B. Di Martino, ... M. Alexander (Eds.), Euro-Par 2010 Parallel Processing Workshops: HeteroPar, HPCC, HiBB, CoreGrid, UCHPC, HPCF, PROPER, CCPI, VHPC: Ischia, Italy, August 31-September 3 2010 : revised selected papers (pp. 287-294). (Lecture Notes in Computer Science; Vol. 6586). Heidelberg: Springer. https://doi.org/10.1007/978-3-642-21878-1_36 [details]
    • Cushing, R., Koulouzis, S., Belloum, A. S. Z., & Bubak, M. (2011). Prediction-based auto-scaling of scientific workflows. In B. Schulze, O. Rana, & E. Madeira (Eds.), Proceedings of the 9th International Workshop on Middleware for Grids, Clouds and e-Science: MGC 2011, co-located with ACM/IFIP/USENIX 12th International Middleware Conference, December 12-16, 2011, Lisbon, Portugal (pp. 1). New York, NY: ACM. https://doi.org/10.1145/2089002.2089003 [details]
    • Cushing, R., Koulouzis, S., Belloum, A., & Bubak, M. (2011). Dynamic handling for cooperating scientific web services. In Proceedings 2011 IEEE Seventh International Conference on eScience: 5-8 December 2011, Stockholm, Sweden (pp. 232-239). Los Alamitos, California: IEEE. https://doi.org/10.1109/eScience.2011.40 [details]
    • Krzhizhanovskaya, V. V., Shirshov, G. S., Melnikova, N. B., Belleman, R. G., Rusadi, F. I., Broekhuijsen, B. J., ... Meijer, R. J. (2011). Flood early warning system: design, implementation and computational modules. Procedia Computer Science, 4, 106-115. https://doi.org/10.1016/j.procs.2011.04.012 [details]
    • Mościcki, J. T., Lamanna, M., Bubak, M., & Sloot, P. M. A. (2011). Processing moldable tasks on the grid: late job binding with lightweight user-level overlay. Future Generation Computer Systems, 27(6), 725-736. https://doi.org/10.1016/j.future.2011.02.002 [details]

    2010

    2009

    • Assel, M., van de Vijver, D., Libin, P., Theys, K., Harezlak, D., Ó Nualláin, B., ... Sloot, P. (2009). A collaborative environment allowing clinical investigations on integrated biomedical databases. Studies in Health Technology and Informatics, 147, 51-61. https://doi.org/10.3233/978-1-60750-027-8-51 [details]
    • Bartyński, T., Bubak, M., Gubała, T., Harężlak, D., Kasztelnik, M., Kocot, J., & Nowakowski, P. (2009). Environment for collaborative e-science applications: CGW08 tutorial. In M. Bubak, M. Turala, & K. Wiatr (Eds.), Cracow'08 Grid Workshop: October 13-15, 2008 Cracow, Poland: proceedings (pp. 58-60). Kraków: Academic Computer Centre CYFRONET AGH. [details]
    • Bubak, M., Malawski, M., Gubala, T., Kasztelnik, M., Nowakowski, P., Harezlak, D., ... Tirado-Ramos, A. (2009). Virtual Laboratory for Collaborative Applications. In M. Cannataro (Ed.), Handbook of research on computational grid technologies for life sciences, biomedicine, and healthcare (pp. 531-551). Hershey, Pa.: Medical Information Science Reference. [details]
    • Gubala, T., Bubak, M., & Sloot, P. M. A. (2009). Semantic Integration for Research Environments. In M. Cannataro (Ed.), Handbook of research on computational grid technologies for life sciences, biomedicine, and healthcare (pp. 514-530). Hershey, Pa.: Medical Information Science Reference. [details]
    • Meizner, J., Malawski, M., Naqvi, S., & Bubak, M. (2009). Threat model for MOCCA component environment. In M. Bubak, M. Turala, & K. Wiatr (Eds.), Cracow'08 Grid Workshop: October 13-15, 2008 Cracow, Poland: proceedings (pp. 94-102). Kraków: Academic Computer Centre CYFRONET AGH. [details]
    • Rząsa, W., & Bubak, M. (2009). Application of Petri nets to evaluation of Grid applications efficiency. In M. Bubak, M. Turala, & K. Wiatr (Eds.), Cracow '08 Grid Workshop: October 13-15, 2008 Cracow, Poland: proceedings (pp. 261-269). Kraków: Academic Computer Centre CYFRONET AGH. [details]
    • Sloot, P. M. A., Coveney, P. V., Ertaylan, G., Müller, V., Boucher, C. A., & Bubak, M. (2009). HIV decision support: From molecule to man. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences, 367(1898), 2691-2703. https://doi.org/10.1098/rsta.2009.0043 [details]

    2008

    • Assel, M., Nowakowski, P., & Bubak, M. (2008). Integrating and accessing medical data resources within the ViroLab Virtual Laboratory. In M. Bubak, G. D. van Albada, J. Dongarra, & P. M. A. Sloot (Eds.), Computational Science – ICCS 2008: 8th International Conference, Kraków, Poland, June 23-25, 2008 : proceedings (Vol. III, pp. 90-99). (Lecture Notes in Computer Science; Vol. 5103). Berlin: Springer. https://doi.org/10.1007/978-3-540-69389-5_12 [details]
    • Badia, R. M., Sirvent, R., Bubak, M., Funika, W., & Machner, P. (2008). Performance monitoring of GRID superscalar with OCM-G/G-PM: Integration issues. In S. Gorlatch, M. Bubak, & T. Priol (Eds.), Achievements in European reseach on Grid systems: CoreGRID Integration Workshop 2006 (selected papers): October 19-20, Krakow, Poland (pp. 193-205). New York, NY: Springer. https://doi.org/10.1007/978-0-387-72812-4_15 [details]
    • Badia, R. M., Sirvent, R., Bubak, M., Funika, W., & Machner, P. (2008). Performance monitoring of Grid superscalar with OCM-G/G-PM: visualization modes. In S. Gorlatch, P. Fragopoulou, & T. Priol (Eds.), Integrated research in grid computing: CoreGRID Integration Workshop 2008, April 2008, Hersonissos, Crete, Greece (pp. 265-274). Heraklion: Crete University Press. [details]
    • Balis, B., Bubak, M., & Łabno, B. (2008). Monitoring of Grid scientific workflows. Scientific Programming, 16(2-3), 205-216. https://doi.org/10.3233/SPR-2008-0257 [details]
    • Balis, B., Bubak, M., Pelczar, M., & Wach, J. (2008). Provenance tracking and querying in ViroLab. In M. Bubak, M. Turała, & K. Wiatr (Eds.), Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings (pp. 71-76). Kraków: Academic Computer Centre CYFRONET AGH. [details]
    • Balis, B., Bubak, M., Pelczar, M., & Wach, J. (2008). Provenance tracking and querying in the ViroLab Virtual Laboratory. In T. Priol, L. Lefevre, & R. Buyya (Eds.), CCGRID 2008: Eighth IEEE International Symposium on Cluster Computing and the Grid: proceedings: 19-22 May, 2008, Lyon, France (pp. 675-680). Los Alamitos, CA: IEEE Computer Society. https://doi.org/10.1109/CCGRID.2008.83 [details]
    • Baliś, B., & Bubak, M. (2008). An ontology model for execution records of Grid scientific applications. In Proceedings of the Fourth International Conference on Semantics, Knowledge and Grid: December 3-5, 2008, Beijing, China (pp. 34-41). Los Alamitos, CA: IEEE Computer Society. [details]
    • Baliś, B., Bubak, M., & Wach, J. (2008). Provenance tracking in the ViroLab Virtual Laboratory. In R. Wyrzykowski, J. Dongarra, K. Karczewski, & J. Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 7th International Conference, PPAM 2007, Gdansk, Poland, September 9-12, 2007 : revised selected papers (pp. 381-390). (Lecture Notes in Computer Science; Vol. 4967). Berlin: Springer. https://doi.org/10.1007/978-3-540-68111-3_40 [details]
    • Baliś, B., Bubak, M., & Wegiel, M. (2008). LGF: A flexible framework for exposing legacy codes as services. Future Generation Computer Systems, 24(7), 711-719. https://doi.org/10.1016/j.future.2007.12.001 [details]
    • Baliś, B., Bubak, M., Pelczar, M., & Wach, J. (2008). Provenance querying for end-users: A drug resistance case study. In M. Bubak, G. D. van Albada, J. Dongarra, & P. M. A. Sloot (Eds.), Computational Science – ICCS 2008: 8th International Conference, Kraków, Poland, June 23-25, 2008 : proceedings (Vol. III, pp. 80-89). (Lecture Notes in Computer Science; Vol. 5103). Berlin: Springer. https://doi.org/10.1007/978-3-540-69389-5_11 [details]
    • Bartyński, T., Malawski, M., & Bubak, M. (2008). Invocation of Grid operations in the ViroLab Virtual Laboratory. In M. Bubak, M. Turała, & K. Wiatr (Eds.), Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings (pp. 59-64). Kraków: Academic Computer Centre CYFRONET AGH. [details]
    • Bartyński, T., Malawski, M., Gubała, T., & Bubak, M. (2008). Universal Grid client: Grid Operation Invoker. In R. Wyrzykowski, J. Dongarra, K. Karczewski, & J. Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 7th International Conference, PPAM 2007, Gdansk, Poland, September 9-12, 2007 : revised selected papers (pp. 1068-1077). (Lecture Notes in Computer Science; Vol. 4967). Berlin: Springer. https://doi.org/10.1007/978-3-540-68111-3_113 [details]
    • Bubak, M., Gubala, T., Malawski, M., Balis, B., Funika, W., Bartynski, T., ... Tirado-Ramos, A. (2008). Virtual laboratory for development and execution of biomedical collaborative applications. In S. Puuronen, M. Pechenizkiy, A. Tsymbal, & D-J. Lee (Eds.), Proceedings of the 21st IEEE international symposium on computer-based medical systems: June 17-19, 2008, Jyväskula, Finland (pp. 373-378). Piscataway, NJ: IEEE Computer Society Press. https://doi.org/10.1109/CBMS.2008.47 [details]
    • Bubak, M., Harezlak, D., Nowakowski, P., Gubala, T., & Malawski, M. (2008). Appea: a framework for the design and development of business applications on the Grid. In M. Bubak, M. Turała, & K. Wiatr (Eds.), Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings (pp. 220-225). Kraków: Academic Computer Centre CYFRONET AGH. [details]
    • Ciepiela, E., Kocot, J., Gubala, T., Malawski, M., Kasztelnik, M., & Bubak, M. (2008). GridSpace Engine of the ViroLab Virtual Laboratory. In M. Bubak, M. Turała, & K. Wiatr (Eds.), Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings (pp. 53-58). Kraków: Academic Computer Centre CYFRONET AGH. [details]
    • Funika, W., Harężlak, D., Król, D., & Bubak, M. (2008). Environment for collaborative development and execution of Virtual Laboratory applications. In M. Bubak, G. D. van Albada, J. Dongarra, & P. M. A. Sloot (Eds.), Computational Science – ICCS 2008: 8th International Conference, Kraków, Poland, June 23-25, 2008 : proceedings (Vol. III, pp. 446-455). (Lecture Notes in Computer Science; Vol. 5103). Berlin: Springer. https://doi.org/10.1007/978-3-540-69389-5_51 [details]
    • Funika, W., Harężlak, D., Król, D., Pęgiel, P., & Bubak, M. (2008). User interfaces of the Virolab Virtual Laboratory. In M. Bubak, M. Turała, & K. Wiatr (Eds.), Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings (pp. 47-52). Kraków: Academic Computer Centre CYFRONET AGH. [details]
    • Funika, W., Zientarski, M., Badia, R. M., Labarta, J., & Bubak, M. (2008). OCM2PRV: performance visualization of Grid applications based on OCM-G and Paraver. In S. Gorlatch, P. Fragopoulou, & T. Priol (Eds.), Integrated research in grid computing: CoreGRID Integration Workshop 2008, April 2008, Hersonissos, Crete, Greece (pp. 87-98). Heraklion: Crete University Press. [details]
    • Gubala, T., Baliś, B., Malawski, M., Kasztelnik, M., Nowakowski, P., Assel, M., ... Bubak, M. (2008). ViroLab Virtual Laboratory. In M. Bubak, M. Turała, & K. Wiatr (Eds.), Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings (pp. 35-40). Kraków: Academic Computer Centre CYFRONET AGH. [details]
    • Gubała, T., Kasztelnik, M., Malawski, M., & Bubak, M. (2008). Towards a system-level science support. In M. Bubak, G. D. van Albada, J. Dongarra, & P. M. A. Sloot (Eds.), Computational Science – ICCS 2008: 8th International Conference, Kraków, Poland, June 23-25, 2008 : proceedings (Vol. I, pp. 56-65). (Lecture Notes in Computer Science; Vol. 5101). Berlin: Springer. https://doi.org/10.1007/978-3-540-69384-0_11 [details]
    • Kasztelnik, M., Gubała, T., Malawski, M., & Bubak, M. (2008). Development and execution of collaborative application on the ViroLab virtual laboratory. In M. Bubak, M. Turała, & K. Wiatr (Eds.), Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings (pp. 41-46). Kraków: Academic Computer Centre CYFRONET AGH. [details]
    • Kowalewski, B., Bubak, M., & Baliś, B. (2008). An event-based approach to reducing coupling in large-scale applications. In M. Bubak, G. D. van Albada, J. Dongarra, & P. M. A. Sloot (Eds.), Computational Science – ICCS 2008: 8th International Conference, Kraków, Poland, June 23-25, 2008 : proceedings (Vol. III, pp. 358-367). (Lecture Notes in Computer Science; Vol. 5103). Berlin: Springer. https://doi.org/10.1007/978-3-540-69389-5_41 [details]
    • Malawski, M., Bartyński, T., & Bubak, M. (2008). A tool for building collaborative applications by invocation of Grid Operations. In M. Bubak, G. D. van Albada, J. Dongarra, & P. M. A. Sloot (Eds.), Computational Science – ICCS 2008: 8th International Conference, Kraków, Poland, June 23-25, 2008 : proceedings (Vol. III, pp. 243-252). (Lecture Notes in Computer Science; Vol. 5103). Berlin: Springer. https://doi.org/10.1007/978-3-540-69389-5_28 [details]
    • Malawski, M., Gubała, T., Kasztelnik, M., Bartynski, T., & Bubak, M. (2008). High-level scripting approach for building component-based applications on the Grid. In M. Danelutto, P. Fragopoulou, & V. Getov (Eds.), Making grids work: Proceedings of the CoreGRID Workshop on Programming Models, Grid and P2P System Architecture, Grid Systems, Tools and Environments, 12-13 June 2007, Heraklion, Crete, Greece (pp. 309-321). New York, NY: Springer. https://doi.org/10.1007/978-0-387-78448-9_25 [details]
    • Malawski, M., Kocot, J., Ciepiela, E., & Bubak, M. (2008). Optimization of application execution in the ViroLab Virtual Laboratory. In M. Bubak, M. Turała, & K. Wiatr (Eds.), Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings (pp. 65-70). Kraków: Academic Computer Centre CYFRONET AGH. [details]
    • Malawski, M., Kocot, J., Ryszka, I., Bubak, M., & Wieczorek, M. (2008). Optimization of application execution in the GridSpace environment. In S. Gorlatch, P. Fragopoulou, & T. Priol (Eds.), Integrated research in grid computing: CoreGRID Integration Workshop 2008, April 2008, Hersonissos, Crete, Greece (pp. 395-405). Heraklion: Crete University Press. [details]
    • Rycerz, K., Bubak, M., & Sloot, P. M. A. (2008). Dynamic interactions in HLA component model for multiscale simulations. In M. Bubak, G. D. van Albada, J. Dongarra, & P. M. A. Sloot (Eds.), Computational Science – ICCS 2008: 8th International Conference, Kraków, Poland, June 23-25, 2008 : proceedings (Vol. II, pp. 217-226). (Lecture Notes in Computer Science; Vol. 5102). Berlin: Springer. https://doi.org/10.1007/978-3-540-69387-1_24 [details]
    • Rycerz, K., Bubak, M., & Sloot, P. M. A. (2008). HLA component based environment for distributed multiscale simulations. In T. Priol, & M. Vanneschi (Eds.), From grids to service and pervasive computing (pp. 229-239). New York, NY: Springer. https://doi.org/10.1007/978-0-387-09455-7_17 [details]
    • Rycerz, K., Bubak, M., & Sloot, P. M. A. (2008). HLA component model on the example of multiscale simulation. In M. Bubak, M. Turała, & K. Wiatr (Eds.), Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings (pp. 272-275). Kraków: Academic Computer Centre CYFRONET AGH. [details]
    • Rycerz, K., Bubak, M., & Sloot, P. M. A. (2008). Using HLA and Grid for distributed multiscale simulations. In R. Wyrzykowski, J. Dongarra, K. Karczewski, & J. Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 7th International Conference, PPAM 2007, Gdansk, Poland, September 9-12, 2007 : revised selected papers (pp. 780-787). (Lecture Notes in Computer Science; Vol. 4967). Berlin: Springer. https://doi.org/10.1007/978-3-540-68111-3_82 [details]
    • Rycerz, K., Bubak, M., Sloot, P., & Getov, V. (2008). Problem solving environment for distributed interactive applications. In S. Gorlatch, M. Bubak, & T. Priol (Eds.), Achievements in European research on grid systems: CoreGRID Integration Workshop 2006 (selected papers), October 19-20, Krakow, Poland (pp. 55-66). New York, NY: Springer. https://doi.org/10.1007/978-0-387-72812-4_5 [details]
    • Sloot, P., Coveney, P., Bubak, M. T., Vandamme, A-M., Ó Nuallain, B., van de Vijver, D., & Boucher, C. (2008). ViroLab: A collaborative decision support system in viral disease treatment. Reviews in Antiviral Therapy, 3, 4-7. [details]
    • Sloot, P., Coveney, P., Bubak, M. T., Vandamme, A-M., Ó Nualláin, B., van de Vijver, D., & Boucher, C. (2008). Multi-science decision support for HIV drug resistance treatment. Studies in Health Technology and Informatics, 138, 188-198. [details]
    • Szepieniec, T., & Bubak, M. (2008). Evaluation of eligible jobs maximization algorithm for DAG scheduling in grids. In M. Bubak, G. D. van Albada, J. Dongarra, & P. M. A. Sloot (Eds.), Computational Science – ICCS 2008: 8th International Conference, Kraków, Poland, June 23-25, 2008 : proceedings (Vol. I, pp. 254-263). (Lecture Notes in Computer Science; Vol. 5101). Berlin: Springer. https://doi.org/10.1007/978-3-540-69384-0_31 [details]
    • Szepieniec, T., & Bubak, M. (2008). Investigation of the DAG eligible jobs maximization algorithm in a grid. In Grid 2008: proceedings of the 2008 9th IEEE/ACM International Conference on Grid Computing: September 29th-October 1st, 2008, Tsukuba, Japan (pp. 340-345). Piscataway, N.J.: IEEE. https://doi.org/10.1109/GRID.2008.4662819 [details]
    • Tirado-Ramos, A., Sloot, P. M. A., & Bubak, M. (2008). Grid­based interactive decision support in biomedicine. In E-G. Talbi, & A. Y. Zomaya (Eds.), Grid computing for bioinformatics and computational biology (pp. 225-246). (Wiley series on bioinformatics : computational techniques and engineering). Hoboken, NJ: Wiley. https://doi.org/10.1002/9780470191637.ch10 [details]
    • Wibisono, A., Zhao, Z., Belloum, A., & Bubak, M. (2008). A framework for interactive parameter sweep applications. In M. Bubak, G. D. van Albada, J. Dongarra, & P. M. A. Sloot (Eds.), Computational Science – ICCS 2008: 8th International Conference, Kraków, Poland, June 23-25, 2008 : proceedings (Vol. III, pp. 481-490). (Lecture Notes in Computer Science; Vol. 5103). Berlin: Springer. https://doi.org/10.1007/978-3-540-69389-5_55 [details]
    • Wibisono, A., Zhao, Z., Belloum, A., & Bubak, M. (2008). Towards a Virtual Laboratory for interactive parameter sweep applications on the Grid. In M. Bubak, M. Turała, & K. Wiatr (Eds.), Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings (pp. 266-271). Kraków: Academic Computer Centre CYFRONET AGH. [details]
    • Zhao, Z., Belloum, A., Bubak, M., & Hertzberger, B. (2008). Support for cooperative experiments in VL-e: from scientific workflows to knowledge sharing. In Fourth IEEE International Conference on eScience (eScience 2008) (pp. 329-330). Los Alamitos, CA: IEEE Computer Society. https://doi.org/10.1109/eScience.2008.120 [details]
    • Łabno, B., Bubak, M., & Baliś, B. (2008). A P2P approach to resource discovery in on-line monitoring of Grid workflows. In E. Luque, T. Margalef, & D. Benítez (Eds.), Euro-Par 2008 – Parallel Processing: 14th International Euro-Par Conference, Las Palmas de Gran Canaria, Spain, August 26-29, 2008 : proceedings (pp. 37-46). (Lecture Notes in Computer Science; Vol. 5168). Berlin: Springer. https://doi.org/10.1007/978-3-540-85451-7_5 [details]

    2013

    • Belloum, A. S. Z., Cushing, R., Koulouzis, S., Korkhov, V., Vasunin, D., Guevara-Masis, V., ... Bubak, M. (2013). Support for Cooperative Experiments in e-Science: From Scientific Workflows to Knowledge Sharing. In I. Roterman-Konieczna (Ed.), Identification of ligand binding site and protein-protein interaction area (pp. 135-159). (Focus on structural biology; No. 8). Dordrecht: Springer. https://doi.org/10.1007/978-94-007-5285-6_7 [details]

    2009

    • Bubak, M., Turała, M., & Wiatr, K. (2009). Cracow '08 Grid Workshop, October 13-15, 2008, Cracow, Poland: proceedings. Kraków: Academic Computer Centre CYFRONET AGH. [details]

    2008

    • Belloum, A., Zhao, Z., & Bubak, M. (2008). International Workshop on Applications of Workflows in Computational Science (AWCS 08). In M. Bubak, G. D. van Albada, J. Dongarra, & P. M. A. Sloot (Eds.), Computational Science – ICCS 2008: 8th International Conference, Kraków, Poland, June 23-25, 2008 : proceedings (Vol. III, pp. 459-462). (Lecture Notes in Computer Science; Vol. 5103). Berlin: Springer. https://doi.org/10.1007/978-3-540-69389-5_52 [details]
    • Bubak, M., Turała, M., & Wiatr, K. (2008). Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings. Kraków: Academic Computer Centre CYFRONET AGH. [details]
    • Bubak, M., van Albada, G. D., Dongarra, J., & Sloot, P. M. A. (Eds.) (2008). Computational Science – ICCS 2008: 8th International Conference, Kraków, Poland, June 23-25, 2008 : proceedings. (Lecture Notes in Computer Science; Vol. 5101). Berlin: Springer. https://doi.org/10.1007/978-3-540-69384-0 [details]
    • Bubak, M., van Albada, G. D., Dongarra, J., & Sloot, P. M. A. (Eds.) (2008). Computational Science – ICCS 2008: 8th International Conference, Kraków, Poland, June 23-25, 2008 : proceedings. (Lecture Notes in Computer Science; Vol. 5102). Berlin: Springer. https://doi.org/10.1007/978-3-540-69387-1 [details]
    • Bubak, M., van Albada, G. D., Dongarra, J., & Sloot, P. M. A. (Eds.) (2008). Computational Science – ICCS 2008: 8th International Conference, Kraków, Poland, June 23-25, 2008 : proceedings. (Lecture Notes in Computer Science; Vol. 5103). Berlin: Springer. https://doi.org/10.1007/978-3-540-69389-5 [details]
    • Gorlatch, S., Bubak, M., & Priol, T. (2008). Achievements in European research on Grid systems: CoreGRID Integration Workshop 2006 (selected papers), October 19-20, Krakow, Poland. New York: Springer. [details]
    • Sloot, P. M. A., Tirado-Ramos, A., Ertaylan, G., O Nuallain, B., van de Vijver, D., Boucher, C. A., & Bubak, M. (2008). VIROLAB: A distributed decision support system for viral disease treatment. In M. Bubak, M. Turała, & K. Wiatr (Eds.), Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings (pp. 33-34). Kraków: Academic Computer Centre CYFRONET AGH. [details]

    2012

    • Koulouzis, S., Cushing, R., Karasavvas, K. A., Belloum, A., & Bubak, M. (2012). Enabling web services to consume and produce large datasets. IEEE Internet Computing, 16(1), 52-60. https://doi.org/10.1109/MIC.2011.138 [details]

    2008

    • Malawski, M., Kocot, J., Ryszka, I., Bubak, M., Wieczorek, M., & Fahringer, T. (2008). Optimization of application execution in the GridSpace environment. (CoreGRID technical report; No. TR-0131). [S.l.]: Institute on Resource Management and Scheduling, CoreGRID. [details]
    • Rycerz, K., Bubak, M., Sloot, P. M. A., & Getov, V. (2008). HLA component based environment for distributed multiscale simulations. (CoreGRID technical report; No. TR-0137). CoreGRID Institute on Grid Systems, Tools, and Environments. [details]

    2012

    • Koulouzis, S., Cushing, R. S., Belloum, A. S. Z., & Bubak, M. T. (2012). Cloud Federation for Sharing Scientific Data. Poster session presented at eScience, .

    2009

    • Bubak, M. T., Gubala, T., Malawski, M., Baliś, B., Funika, W., Bartynski, T., ... Assel, M. (2009). A platform for collaborative e-science applications. 7-9. Abstract from KU KDM 2009 - Konferencja Użytkowników Komputerów Dużej Mocy, Zakopane, Poland.
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