Prof. dr. P.V. (Peter Vivian) Coveney
Faculty of Science
Informatics Institute
Visiting address
- Science Park 904
Postal address
- Postbus 94323
1090 GH Amsterdam
Contact details
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Publications
- refereed (26)
- academic (1)
- popular scientific (1)
- conference contributions (1)
- supervised theses (1)
- datasets (1)
2021
- Coveney, P. V., Groen, D., & Hoekstra, A. G. (2021). Reliability and reproducibility in computational science: implementing validation, verification and uncertainty quantification in silico. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 379(2197), [20200409]. https://doi.org/10.1098/rsta.2020.0409 [details]
- Coveney, P. V., Hoekstra, A., Rodriguez, B., & Viceconti, M. (2021). Computational biomedicine. Part II: Organs and systems. Interface Focus, 11(1), [20200082]. https://doi.org/10.1098/rsfs.2020.0082 [details]
Edeling, W., Arabnejad, H., Sinclair, R., Suleimenova, D., Gopalakrishnan, K., Bosak, B., Groen, D., Mahmood, I., Crommelin, D., & Coveney, P. V. (2021). The impact of uncertainty on predictions of the CovidSim epidemiological code. Nature Computational Science, 1(2), 128-135. https://doi.org/10.1038/s43588-021-00028-9 [details]- Gheorghiu, A., Coveney, P. V., & Arabi, A. A. (2021). The influence of external electric fields on proton transfer tautomerism in the guanine-cytosine base pair. Physical Chemistry Chemical Physics, 23(10), 6252-6265. https://doi.org/10.1039/d0cp06218a
- Groen, D., Arabnejad, H., Jancauskas, V., Edeling, W. N., Jansson, F., Richardson, R. A., Lakhlili, J., Veen, L., Bosak, B., Kopta, P., Wright, D. W., Monnier, N., Karlshoefer, P., Suleimenova, D., Sinclair, R., Vassaux, M., Nikishova, A., Bieniek, M., Luk, O. O., ... Coveney, P. V. (2021). VECMAtk: a scalable verification, validation and uncertainty quantification toolkit for scientific simulations. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences, 379(2197), [20200221]. https://doi.org/10.1098/rsta.2020.0221 [details]
- McCullough, J. W. S., & Coveney, P. V. (2021). An efficient, localised approach for the simulation of elastic blood vessels using the lattice Boltzmann method. Scientific Reports, 11(1), [24260]. https://doi.org/10.1038/s41598-021-03584-2
- McCullough, J. W. S., & Coveney, P. V. (2021). High fidelity blood flow in a patient-specific arteriovenous fistula. Scientific Reports, 11(1), [22301]. https://doi.org/10.1038/s41598-021-01435-8
- Suleimenova, D., Arabnejad, H., Edeling, W. N., Coster, D., Luk, O. O., Lakhlili, J., Jancauskas, V., Kulczewski, M., Veen, L., Ye, D., Zun, P., Krzhizhanovskaya, V., Hoekstra, A., Crommelin, D., Coveney, P. V., & Groen, D. (2021). Tutorial applications for Verification, Validation and Uncertainty Quantification using VECMA toolkit. Journal of Computational Science, 53, [101402]. https://doi.org/10.1016/j.jocs.2021.101402 [details]
- Suter, J. L., & Coveney, P. V. (2021). Principles governing control of aggregation and dispersion of aqueous graphene oxide. Scientific Reports, 11(1), [22460]. https://doi.org/10.1038/s41598-021-01626-3
2020
- Wright, D. W., Richardson, R. A., Edeling, W., Lakhlili, J., Sinclair, R. C., Jancauskas, V., Suleimenova, D., Bosak, B., Kulczewski, M., Piontek, T., Kopta, P., Chirca, I., Arabnejad, H., Luk, O. O., Hoenen, O., Węglarz, J., Crommelin, D., Groen, D., & Coveney, P. V. (2020). Building Confidence in Simulation: Applications of EasyVVUQ. Advanced Theory and Simulations, 3(8), [1900246]. https://doi.org/10.1002/adts.201900246 [details]
2019
- Alowayyed, S., Piontek, T., Suter, J. L., Hoenen, O., Groen, D., Luk, O., Bosak, B., Kopta, P., Kurowski, K., Perks, O., Brabazon, K., Jancauskas, V., Coster, D., Coveney, P. V., & Hoekstra, A. G. (2019). Patterns for High Performance Multiscale Computing. Future Generation Computer Systems, 91, 335-346. https://doi.org/10.1016/j.future.2018.08.045 [details]
- Alowayyed, S., Vassaux, M., Czaja, B., Coveney, P. V., & Hoekstra, A. G. (2019). Towards heterogeneous multi-scale computing on large scale parallel supercomputers. Supercomputing Frontiers and Innovations, 6(4), 20-43. https://doi.org/10.14529/jsfi190402 [details]
- Groen, D., Richardson, R. A., Wright, D. W., Jancauskas, V., Sinclair, R., Karlshoefer, P., ... Coveney, P. V. (2019). Introducing VECMAtk - Verification, Validation and Uncertainty Quantification for Multiscale and HPC Simulations. In J. M. F. Rodrigues, P. J. S. Cardoso, J. Monteiro, R. Lam, V. V. Krzhizhanovskaya, M. H. Lees, J. J. Dongarra, ... P. M. A. Sloot (Eds.), Computational Science – ICCS 2019 : 19th International Conference Faro, Portugal, June 12-14, 2019 Proceedings (Vol. IV, pp. 479-492). (Lecture Notes in Computer Science; Vol. 11539). Cham: Springer. https://doi.org/10.1007/978-3-030-22747-0_36 [details]
- Hoekstra, A. G., Chopard, B., Coster, D., Portegies Zwart, S., & Coveney, P. V. (2019). Multiscale computing for science and engineering in the era of exascale performance. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences, 377(2142), [20180144]. https://doi.org/10.1098/rsta.2018.0144 [details]
- Hoekstra, A. G., Portegies Zwart, S., & Coveney, P. V. (2019). Multiscale modelling, simulation and computing: from the desktop to the exascale. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences, 377(2142), [20180355]. https://doi.org/10.1098/rsta.2018.0355 [details]
2017
- Alowayyed, S., Groen, D., Coveney, P. V., & Hoekstra, A. G. (2017). Multiscale computing in the exascale era. Journal of Computational Science, 22, 15-25. https://doi.org/10.1016/j.jocs.2017.07.004 [details]
2014
- Borgdorff, J., Ben Belgacem, M., Bona-Casas, C., Fazendeiro, L., Groen, D., Hoenen, O., Mizeranschi, A., Sutter, J. L., Coster, D., Coveney, P. V., Dubitzky, W., Hoekstra, A. G., Strand, P., & Chopard, B. (2014). Performance of distributed multiscale simulations. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences, 372(2021), [20130407]. https://doi.org/10.1098/rsta.2013.0407 [details]
- Borgdorff, J., Mamonski, M., Bosak, B., Kurowski, K., Ben Belgacem, M., Chopard, B., Groen, D., Coveney, P. V., & Hoekstra, A. G. (2014). Distributed multiscale computing with MUSCLE 2, the Multiscale Coupling Library and Environment. Journal of Computational Science, 5(5), 719-731. https://doi.org/10.1016/j.jocs.2014.04.004 [details]
- Hoekstra, A., Chopard, B., & Coveney, P. (2014). Multiscale modelling and simulation: a position paper. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences, 372(2021), [20130377]. https://doi.org/10.1098/rsta.2013.0377 [details]
- Karabasov, S., Nerukh, D., Hoekstra, A., Chopard, B., & Coveney, P. V. (2014). Multiscale modelling: approaches and challenges. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences, 372(2021), [20130390]. https://doi.org/10.1098/rsta.2013.0390 [details]
2013
- Groen, D., Borgdorff, J., Bona-Casas, C., Hetherington, J., Nash, R. W., Zasada, S. J., Saverchenko, I., Mamonski, M., Kurowski, K., Bernabeu, M. O., Hoekstra, A. G., & Coveney, P. V. (2013). Flexible composition and execution of high performance, high fidelity multiscale biomedical simulations. Interface Focus, 3(2), [20120087]. https://doi.org/10.1098/rsfs.2012.0087 [details]
2012
- Zasada, S. J., Mamonski, M., Groen, D., Borgdorff, J., Saverchenko, I., Piontek, T., Kurowski, K., & Coveney, P. V. (2012). Distributed infrastructure for multiscale computing. In A. Boukerche, V. Cahill, A. El-Saddik, G. Theodoropoulos, & R. Walshe (Eds.), 2012 IEEE/ACM 16th International Symposium on Distributed Simulation and Real Time Applications: DS-RET 2012: Proceedings (pp. 65-74). IEEE Computer Society. https://doi.org/10.1109/DS-RT.2012.17 [details]
2010
- Hoekstra, A. G., & Coveney, P. (2010). Towards distributed multiscale computing for the VPH. In Conference abstracts VPH 2010, 1st Virtual Physiological Human Conference (pp. 198-200). VPH Network of Excellence. http://www.vph-noe.eu/vph-repository/doc_download/204-book-of-abstracts-for-vph2010 [details]
2009
- Sloot, P. M. A., Coveney, P. V., Ertaylan, G., Müller, V., Boucher, C. A., & Bubak, M. (2009). HIV decision support: From molecule to man. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences, 367(1898), 2691-2703. https://doi.org/10.1098/rsta.2009.0043 [details]
2008
- Sloot, P., Coveney, P., Bubak, M. T., Vandamme, A-M., Ó Nuallain, B., van de Vijver, D., & Boucher, C. (2008). ViroLab: A collaborative decision support system in viral disease treatment. Reviews in Antiviral Therapy, 3, 4-7. http://www.science.uva.nl/research/scs/papers/archive/Sloot2008e.pdf [details]
- Sloot, P., Coveney, P., Bubak, M. T., Vandamme, A-M., Ó Nualláin, B., van de Vijver, D., & Boucher, C. (2008). Multi-science decision support for HIV drug resistance treatment. Studies in Health Technology and Informatics, 138, 188-198. http://www.science.uva.nl/research/scs/papers/archive/Sloot2008c.pdf [details]
2014
- Karabasov, S. (Guest ed.), Nerukh, D. (Guest ed.), Hoekstra, A. (Guest ed.), Chopard, B. (Guest ed.), & Coveney, P. (Guest ed.) (2014). Multi-scale systems in fluids and soft matter: approaches, numerics and applications: papers of a theme issue. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences, 372(2021). http://rsta.royalsocietypublishing.org/content/372/2021 [details]
2012
- Borgdorff, J., Groen, D., Ferlin, S., Saverchenko, I., Suter, J., Hoekstra, A. G., & Coveney, P. V. (2012). Multiscale Simulations on Distributed European e-Infrastructures. Inside, 10(1), 72-77. http://inside.hlrs.de/assets/pdfs/inside_spring12.pdf
2012
- Groen, D., Borgdorff, J., Zasada, S. J., Bona Casas, C., Hetherington, J., Nash, R., Hoekstra, A. G., & Coveney, P. (2012). A Distributed Infrastructure for Multiscale Biomedical Simulations. Abstract from VPH 2012 Conference of the Virtual Physiological Human Network of Excellence, London, United Kingdom.
2021
- Arabnejad, H., Groen, D. J., Gopalakrishnan, K., Bosak, B., Crommelin, D., Coveney, P., Suleimenova, D., Edeling, W. & Mahmood, I. (16-1-2021). FabCovidSim. Zenodo. https://doi.org/10.5281/zenodo.4445290
This list of publications is extracted from the UvA-Current Research Information System. Questions? Ask the library or the Pure staff of your faculty / institute. Log in to Pure to edit your publications. Log in to Personal Page Publication Selection tool to manage the visibility of your publications on this list. -
Ancillary activities
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University of London
Professor Physical Chemistry, Director Centre for Computational Science -
Yale University, USA
Professor Adjunct within the Medical School -
CBK Sci Con, UK
Founder and Scientific / Technical director -
Ensemble MD ltd, UK
Director
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University of London
Edeling, W., Arabnejad, H., Sinclair, R., Suleimenova, D., Gopalakrishnan, K., Bosak, B., Groen, D., Mahmood, I., Crommelin, D., & Coveney, P. V. (2021). The impact of uncertainty on predictions of the CovidSim epidemiological code. Nature Computational Science, 1(2), 128-135.